Intra-genomic genes-to-genes correlation enables genome representation
Jingjie Chen, Xuchuan Ma, Junwei He, Yingxia Wang, Yuji Ren, Li Qi, Liuyang Song, Lin Ruan, Cun Fan, Tao Huang, Jingbo Cheng, Xing Liu, Fang Chen, Yichen Huang, Haifeng Wang, , Chunming Guo
The paper shows that combinations of highly variable core genes can accurately predict sequence variants and antibiotic resistance in bacterial genomes.
bioRxiv · Jun 12, 2024 · PreprintBioinformatics