Author

Joaquin Dopazo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:differential expression· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alicia AmadoziD· 1 shared Cankut Cubuk· 1 shared Francisco Salavert· 1 shared Jose Carbonell Caballero· 1 shared Luz Garcia-Alonso· 1 shared Marta R Hidalgo· 1 shared

Activity by Year

2015-2016 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 10 mutual co-author links

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1 shared paperBioinformatics

Alicia AmadozORCID

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2 papers

Recent·Most cited

High throughput estimation of functional cell activities reveals disease mechanisms and predicts relevant clinical outcomes

Marta R Hidalgo, Cankut Cubuk, Alicia Amadoz, Francisco Salavert, Jose Carbonell Caballero, Joaquin Dopazo

This paper introduces a method to estimate cell functional activities from gene expression and mutations, showing its utility in disease mechanisms and clinical outcome prediction across 5640 cancer patients.

bioRxiv · Sep 19, 2016Bioinformatics

Mutational oncogenic signatures on structurally resolved protein interacting interfaces

Luz Garcia-Alonso, Joaquin Dopazo

The paper maps cancer mutations onto a structurally resolved interactome to identify mutation hotspots in protein interfaces linked to cancer progression and patient survival.

bioRxiv · Mar 7, 2015 · PreprintGenomics