Author

Joel Shuman

Virginia Tech

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

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Organism:Arabidopsis· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Assay:snRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Bastiaan O. R. BargmanniD· 1 shared Razan M. AlajoleeniD· 1 shared Song LiiD· 1 shared Tran N ChauiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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4 top collaborators · 6 mutual co-author links

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1 shared paperBioinformatics

Bastiaan O. R. BargmannORCID

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1 paper

Recent·Most cited

Single nucleus transcriptome analysis of Arabidopsis thaliana roots infected with Phytophthora. capsici

Razan M. Alajoleen, Tran N Chau, Joel Shuman, Bastiaan O. R. Bargmann, Song Li

The paper uses snRNA-seq to analyze Arabidopsis root cell responses to P. capsici infection, identifying transcriptional changes and hormone-related pathways in different cell types.

bioRxiv · May 1, 2026 · PreprintBioinformatics