Author

John Huddleston

Primary ORCID profile (0000-0002-4250-2063 · 10 papers)Unclaimed ORCID profile · follow to get notified of new preprints

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

John HuddlestoniD10 papers · Fred Hutch Cancer Center

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Research Focus:genome assembly· 2 Organism:human· 2 Assay:whole-genome sequencing· 2

Frequent Co-Authors

Karyn Meltz Steinberg· 2 shared Aleksandr Morgulis· 1 shared Amy Ly· 1 shared Archana Raja· 1 shared Carl Baker· 1 shared Chad Tomlinson· 1 shared Chris Amemiya· 1 shared Deanna M Church· 1 shared

Activity by Year

2014-2016 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Karyn Meltz Steinberg

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

High-Quality Assembly of an Individual of Yoruban Descent

Karyn Meltz Steinberg, Tina Graves Lindsay, Valerie A. Schneider, Mark J.P. Chaisson, Chad Tomlinson, John Huddleston, Patrick Minx, Milinn Kremitzki, Derek Albrecht, Vincent Magrini, Sean McGrath, Archana Raja, Carl Baker, Lana Harshman, LaDeana W. Hillier, , Richard K. Wilson

This paper presents a high-quality de novo assembly of a Yoruban individual using multiple sequencing technologies and demonstrates the utility of diploid assembly in improving genome quality.

bioRxiv · Aug 2, 2016 · PreprintBioinformatics

Single haplotype assembly of the human genome from a hydatidiform mole

Karyn Meltz Steinberg, Valerie K Schneider, Tina A Graves-Lindsay, Robert S Fulton, Richa Agarwala, John Huddleston, Sergey A Shiryayev, Aleksandr Morgulis, Urvashi Surti, Wesley C Warren, Deanna M Church, Evan E Eichler, Richard K Wilson

The paper presents a haploid human genome assembly from a hydatidiform mole, highlighting its high quality but identifying misassembled regions enriched for structural variation.

bioRxiv · Jul 3, 2014Genomics