Author

Jonathan Pritchard

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Assay:ChIP-seq· 2 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Research Focus:eQTL / molecular QTL mapping· 1 Research Focus:GWAS / association mapping· 1 Organism:human· 1

Frequent Co-Authors

Yoav GiladiD· 2 shared Alkes L Price· 1 shared Barak Markus· 1 shared Bryce van de Geijn· 1 shared Carolyn Cain· 1 shared Emily Davenport· 1 shared Graham McVicker· 1 shared Haoyang Zeng· 1 shared

Activity by Year

2014-2016 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersGenomics

Yoav GiladORCID

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3 papers

Recent·Most cited

Abundant contribution of short tandem repeats to gene expression variation in humans

Melissa Gymrek, Thomas Willems, Haoyang Zeng, Barak Markus, Mark J Daly, Alkes L Price, Jonathan Pritchard, Yaniv Erlich

The paper identifies 2,060 expression STRs (eSTRs) contributing 10%-15% of cis-heritability to gene expression, highlighting their role as regulatory variants.

Nature Genetics · Jan 1, 2016Peer-reviewedGenomics

WASP: allele-specific software for robust discovery of molecular quantitative trait loci

Bryce van de Geijn, Graham McVicker, Yoav Gilad, Jonathan Pritchard

WASP improves the discovery of molecular QTLs by providing robust allele-specific read mapping and analysis, showing lower error rates and higher power than existing methods.

Nature Methods · Sep 14, 2015Peer-reviewedGenomics

Epigenetic Modifications are Associated with Inter-species Gene Expression Variation in Primates

Xiang Zhou, Carolyn Cain, Marsha Myrthil, Noah Lewellen, Katelyn Michelini, Emily Davenport, Matthew Stephens, Jonathan Pritchard, Yoav Gilad

The paper investigates how epigenetic marks contribute to gene expression differences between primate species using lymphoblastoid cell lines.

bioRxiv · Mar 19, 2014Genomics