Author

Jose Miguel Ramirez

Barcelona Supercomputing Center

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Aisha Shah· 1 shared Alba Jimenez-Lupiañez· 1 shared Fairlie ReeseiD· 1 shared Marta MeléiD· 1 shared Miguel Vazquez· 1 shared Pablo Perez-Cano· 1 shared Raquel García-PéreziD· 1 shared Winona OliverosiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

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8 top collaborators · 28 mutual co-author links

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1 shared paperBioinformatics

Aisha Shah

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1 paper

Recent·Most cited

rDNAcaller: a fast and robust pipeline to call ribosomal DNA variants

Jose Miguel Ramirez, Winona Oliveros, Raquel García-Pérez, Alba Jimenez-Lupiañez, Aisha Shah, Pablo Perez-Cano, Fairlie Reese, Miguel Vazquez, Marta Melé

The paper introduces rDNAcaller, a pipeline for accurate rDNA variant detection using short-read whole-genome sequencing, achieving 94% precision and identifying 5,607 novel variant positions across human populations.

NAR Genomics and Bioinformatics · Oct 7, 2025Peer-reviewedBioinformatics