Author

Joseph D. Nguyen

National Institute on Drug Abuse

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Neuroscience· 1

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:dimensionality reduction· 1 Approach:experimental assay· 1 Assay:imaging· 1 Organism:mouse· 1 Research Focus:software / tool· 1 Assay:spatial transcriptomics· 1

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Carlos A. Mejias-Aponte· 1 shared Michelle JiniD· 1 shared Rajtarun MadangopaliD· 1 shared Sam A. GoldeniD· 1 shared Sophia J. WeberiD· 1 shared

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2022-2022 · peak 1/yr

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1 shared paperNeuroscience

Carlos A. Mejias-Aponte

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1 paper

Recent·Most cited

SMART: An open source extension of WholeBrain for iDISCO+ LSFM intact mouse brain registration and segmentation

Michelle Jin, Joseph D. Nguyen, Sophia J. Weber, Carlos A. Mejias-Aponte, Rajtarun Madangopal, Sam A. Golden

SMART is an open-source R package that extends WholeBrain for registering and segmenting intact mouse brain images to the Allen Brain Institute CCF, with a modified iDISCO+ protocol for Fos labeling.

eNeuro · Apr 8, 2022Peer-reviewedNeuroscience