Author

Joseph N. Paulson

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:metagenomics· 2 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

Abhinav Nellore· 1 shared Adam Stine· 1 shared Alfred Chan· 1 shared Allissa DillmaniD· 1 shared Ben BusbyiD· 1 shared Bobby Bhattacharjee· 1 shared Brendan Miller· 1 shared Cem Mayden· 1 shared

Activity by Year

2015-2015 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperGenomics

Abhinav Nellore

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Privacy-Preserving Microbiome Analysis Using Secure Computation

Justin Wagner, Joseph N. Paulson, Xiao-Shun Wang, Bobby Bhattacharjee, Hector Corrada Bravo

The paper develops a privacy-preserving framework for microbiome analysis using secure computation to enable collaborative research without revealing individual patient data.

bioRxiv · Sep 3, 2015Bioinformatics

Building Genomic Analysis Pipelines in a Hackathon Setting with Bioinformatician Teams: DNA-seq, Epigenomics, Metagenomics and RNA-seq

Ben Busby, Allissa Dillman, Claire L. Simpson, Ian Fingerman, Sijung Yun, David M. Kristensen, Lisa Federer, Naisha Shah, Matthew C. LaFave, Laura Jimenez-Barron, Manjusha Pande, Wen Luo, Brendan Miller, Cem Mayden, Dhruva Chandramohan, , Eugene Yaschenko

The paper describes a hackathon where bioinformatician teams developed open-source genomic analysis pipelines for DNA-seq, epigenomics, metagenomics, and RNA-seq using publicly available or soon-to-be-submitted data.

bioRxiv · May 5, 2015 · PreprintGenomics