Author

Joshua Lynch

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:metagenomics· 2 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Approach:statistical model· 1

Frequent Co-Authors

Ran BlekhmaniD· 2 shared Alain FromentiD· 1 shared Dan KnightsiD· 1 shared Elise R Morton· 1 shared Evelyne Heyer· 1 shared Laure Segurel· 1 shared Michael B Burns· 1 shared Molly Przeworski· 1 shared

Activity by Year

2015-2015 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersMicrobiology

Ran BlekhmanORCID

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2 papers

Recent·Most cited

Variation in rural African gut microbiota is strongly correlated with colonization by Entamoeba and subsistence

Elise R Morton, Joshua Lynch, Alain Froment, Sophie Lafosse, Evelyne Heyer, Molly Przeworski, Ran Blekhman, Laure Segurel

This study examines the gut microbiota of rural African populations, finding strong correlations between microbiome composition, subsistence mode, and colonization by the parasite Entamoeba.

PLOS Genetics · Nov 30, 2015Peer-reviewedMicrobiology

Virulence genes are a signature of the microbiome in the colorectal tumor microenvironment

Michael B Burns, Joshua Lynch, Timothy K Starr, Dan Knights, Ran Blekhman

The paper identifies virulence genes as a signature of the microbiome in the colorectal tumor microenvironment, highlighting novel bacterial taxa and their potential role in cancer development.

Genome Medicine · Jun 24, 2015Peer-reviewedGenomics