Strand Orientation Bias Detector (SOBDetector) to remove FFPE sequencing artifacts
Miklós Dióssy, Zsófia M. Sztupinszki, Marcin Krzystanek, Judit Borcsok, Aron C. Eklund, István Csabai, Anders Gorm Pedersen, Zoltán Szállási
SOBDetector removes FFPE sequencing artifacts by using a Bayesian logistic regression model trained on TCGA whole exomes, achieving high accuracy and AUC.
bioRxiv · Nov 28, 2019 · PreprintBioinformatics