Author

Aron C. Eklund

Clinical Microbiomics (Denmark)ORCID 0000-0003-0861-1001Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:benchmark study· 1 Research Focus:database / resource· 1 Assay:metagenomics· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Anders Gorm PederseniD· 1 shared Henrik Bjørn NielseniD· 1 shared István CsabaiiD· 1 shared Jakob RusseliD· 1 shared Joachim JohanseniD· 1 shared Judit Borcsok· 1 shared Mads Cort NielseniD· 1 shared Marcin KrzystanekiD· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Anders Gorm PedersenORCID

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2 papers

Recent·Most cited

BioinformaticsFrontiers in MicrobiologyPeer-reviewedOct 17, 2024

CHAMP delivers accurate taxonomic profiles of the prokaryotes, eukaryotes, and bacteriophages in the human microbiome

Sara Pita, Pernille Neve Myers, Joachim Johansen…·Henrik Bjørn Nielsen

CHAMP provides accurate taxonomic profiling of prokaryotes, eukaryotes, and viruses in the human microbiome, outperforming existing tools in recall, F1 score, and false positive reduction.

23 citations

humanmetagenomics

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BioinformaticsbioRxivPreprintNov 28, 2019

Strand Orientation Bias Detector (SOBDetector) to remove FFPE sequencing artifacts

Miklós Dióssy, Zsófia M. Sztupinszki, Marcin Krzystanek…·Zoltán Szállási

SOBDetector removes FFPE sequencing artifacts by using a Bayesian logistic regression model trained on TCGA whole exomes, achieving high accuracy and AUC.

3 citations

humanwhole-exome sequencing

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