Author

Marcin Krzystanek

Danish Cancer SocietyORCID 0000-0002-5920-2147Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Anders Gorm PederseniD· 1 shared Aron C. EklundiD· 1 shared István CsabaiiD· 1 shared Judit Borcsok· 1 shared Miklós DióssyiD· 1 shared Zoltán SzállásiiD· 1 shared Zsófia M. SztupinszkiiD· 1 shared

Activity by Year

2019-2019 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Anders Gorm PedersenORCID

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1 paper

Recent·Most cited

Strand Orientation Bias Detector (SOBDetector) to remove FFPE sequencing artifacts

Miklós Dióssy, Zsófia M. Sztupinszki, Marcin Krzystanek, Judit Borcsok, Aron C. Eklund, István Csabai, Anders Gorm Pedersen, Zoltán Szállási

SOBDetector removes FFPE sequencing artifacts by using a Bayesian logistic regression model trained on TCGA whole exomes, achieving high accuracy and AUC.

bioRxiv · Nov 28, 2019 · PreprintBioinformatics