Author

K K Kanaka

ICAR-Indian Institute of Agricultural Biotechnology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:genome assembly· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Organism:plant (other)· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1 Assay:whole-exome sequencing· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Tanmaya Kumar SahuiD· 2 shared Vijai Pal BhadanaiD· 2 shared A. PattanayakiD· 1 shared Avinash PandeyiD· 1 shared Binay Kumar SinghiD· 1 shared K. C. NikhiliD· 1 shared Kishor U. TribhuvaniD· 1 shared Madhu RameshiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersBioinformatics

Tanmaya Kumar SahuORCID

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2 papers

Recent·Most cited

AlphaGenome informed machine learning for pathogenicity prediction of germline mutations

Pankaj Kumar, Srishti Singh, Sandip Garai, Madhu Ramesh, Rangasai Chandra Goli, K. C. Nikhil, Tanmaya Kumar Sahu, Soumen Naskar, Vijai Pal Bhadana, Madhusudan Reddy Nandineni, K K Kanaka

AGVarPred is a gradient-boosted classifier that improves pathogenicity prediction of germline variants by integrating AlphaGenome features, outperforming existing models across SNVs and indels.

bioRxiv · Oct 25, 2026 · PreprintBioinformatics

Chromosome-Scale, Telomere-to-Telomere Assembly of Winged Bean (Psophocarpus tetragonolobus (L.) DC.) Genome Reveals Lipid Biosynthetic Hotspots and Gene Family Dynamics

Kishor U. Tribhuvan, Nikhil Kumar Singh, Binay Kumar Singh, Avinash Pandey, Sudhir Kumar, Sujit Kumar Bishi, K K Kanaka, Tanmaya Kumar Sahu, A. Pattanayak, Vijai Pal Bhadana, Sujay Rakshit

The paper presents a high-quality, chromosome-scale genome assembly of the winged bean, identifying lipid biosynthesis hotspots and gene family dynamics.

bioRxiv · Aug 4, 2025 · PreprintGenomics