Author

Tanmaya Kumar Sahu

ICAR-Indian Institute of Agricultural BiotechnologyORCID 0000-0003-0799-0660Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:genome assembly· 1 Research Focus:GWAS / association mapping· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

K K Kanaka· 2 shared Vijai Pal BhadanaiD· 2 shared A. PattanayakiD· 1 shared Amit Kumar SinghiD· 1 shared Avinash PandeyiD· 1 shared Binay Kumar SinghiD· 1 shared C. GayacharaniD· 1 shared Debasis ChattopadhyayiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersBioinformatics

K K Kanaka

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 25, 2026

AlphaGenome informed machine learning for pathogenicity prediction of germline mutations

Pankaj Kumar, Srishti Singh, Sandip Garai…·K K Kanaka

AGVarPred is a gradient-boosted classifier that improves pathogenicity prediction of germline variants by integrating AlphaGenome features, outperforming existing models across SNVs and indels.

DOI 10.64898/2026.10.20.760593

humanwhole-exome sequencing

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GenomicsbioRxivPreprintAug 4, 2025

Chromosome-Scale, Telomere-to-Telomere Assembly of Winged Bean (Psophocarpus tetragonolobus (L.) DC.) Genome Reveals Lipid Biosynthetic Hotspots and Gene Family Dynamics

Kishor U. Tribhuvan, Nikhil Kumar Singh, Binay Kumar Singh…·Sujay Rakshit

The paper presents a high-quality, chromosome-scale genome assembly of the winged bean, identifying lipid biosynthesis hotspots and gene family dynamics.

DOI 10.1101/2025.08.04.668583

plant (other)whole-genome sequencing

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BioinformaticsbioRxivPreprintFeb 25, 2023

An associative transcriptomics study on rice bean (Vigna umbellata) provides new insights into genetic basis and candidate genes governing flowering, maturity and seed weight

Tanmaya Kumar Sahu, Sachin Kumar Verma, C. Gayacharan…·Amit Kumar Singh

The paper identifies candidate genes associated with flowering, maturity, and seed weight in rice bean using transcriptome sequencing and GWAS analysis.

2 citations

plant (other)bulk RNA-seq

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