Author

K. Kalies

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Immunology· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Organism:mouse· 2 Assay:bulk RNA-seq· 1 Assay:CITE-seq· 1 Approach:deep learning· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

A. Fähnrich· 2 shared J. Textor· 2 shared J. Westermann· 2 shared R. Pagel· 2 shared C. Tune· 1 shared D. Rogers· 1 shared E. Mallet Gauthier· 1 shared F. Buytenhuijs· 1 shared

Activity by Year

2017-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersImmunology

A. Fähnrich

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Machine learning analysis of the T cell receptor repertoire identifies sequence features that predict self-reactivity

J. Textor, F. Buytenhuijs, D. Rogers, E. Mallet Gauthier, S. Sultan, I. M. N. Wortel, K. Kalies, A. Fähnrich, R. Pagel, H. Melichar, J. Westermann, J. N. Mandl

The paper uses machine learning to identify TCR sequence features predicting self-reactivity, finding that n-nucleotide additions and acidic amino acids reduce self-reactivity.

bioRxiv · Nov 23, 2022Immunology

Deep Sequencing Reveals Transient Segregation of T Cell Repertoires in Splenic T Cell Zones During an Immune Response

J. Textor, A. Fähnrich, M. Meinhardt, C. Tune, S. Klein, R. Pagel, P. König, K. Kalies, J. Westermann

The paper uses deep sequencing to show that T cell receptor repertoires in splenic T cell zones are transiently segregated during an immune response but not in the absence of antigen.

bioRxiv · Dec 8, 2017Immunology