Use of FFPE-Derived DNA in Next Generation Sequencing: DNA extraction methods
Samantha J. McDonough, Aditya Vijay Bhagwate, Zhifu Sun, Chen Wang, Michael A. Zschunke, Joshua A. Gorman, Karla J. Kopp, Julie M. Cunningham
The paper evaluates nine FFPE DNA extraction methods for NGS, finding average WES coverage of ~20-30X and 99% genotype concordance with targeted panels.
PLoS ONE · Apr 11, 2019Peer-reviewedMolecular Biology