Author

Katherine Johnson

Case Western Reserve UniversityPrimary ORCID profile (0009-0008-0949-5739 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Katherine JohnsoniD1 paper · University of Southern California

Biology Disciplines

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Molecular Biology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

Ahmet Oguzhan OzeniD· 1 shared Ana KroloiD· 1 shared Anju ShuklaiD· 1 shared Annabel C. WhibleyiD· 1 shared Anshika SrivastavaiD· 1 shared Ashleigh E. SchafferiD· 1 shared Brandon A. BergeriD· 1 shared Ceridwen I. FraseriD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperMolecular Biology

Ahmet Oguzhan OzenORCID

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2 papers

Recent·Most cited

A Cry For Kelp: Evidence for Polyphenolic Inhibition of Oxford Nanopore Sequencing of Brown Algae

William S. Pearman, Vanessa Arranz, Jose I. Carvajal, Annabel C. Whibley, Yusmiati Liau, Katherine Johnson, Rachel Gray, Jackson M. Treece, Neil J. Gemmell, Libby Liggins, Ceridwen I. Fraser, Evelyn L. Jensen, Nicholas J. Green

The paper shows that polyphenols in dried macroalgal DNA inhibit Oxford Nanopore sequencing, reducing yield and pore availability.

Journal of Phycology · Oct 22, 2024Peer-reviewedMolecular Biology

Mechanisms of mRNA processing defects in inherited THOC6 intellectual disability syndrome

Elizabeth A. Werren, Geneva R. LaForce, Anshika Srivastava, Delia R. Perillo, Katherine Johnson, Safa Barış, Brandon A. Berger, Samantha L. Regan, Christian D. Pfennig, Sonja de Munnik, Rolph Pfundt, Malavika Hebbar, Raúl Jiménez Heredia, Elif Karakoç-Aydıner, Ahmet Oguzhan Ozen, , Ashleigh E. Schaffer

This study investigates mRNA processing defects in THOC6 intellectual disability syndrome by analyzing human and mouse models, revealing mRNA mis-splicing and novel TREX tetramer functions.

bioRxiv · Sep 6, 2022 · PreprintMolecular Biology