Author

Rachel Gray

Newcastle UniversityORCID 0000-0002-1192-1505Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Albi CelajiD· 1 shared Andrew JungiD· 1 shared Annabel C. WhibleyiD· 1 shared Bhargav KanuparthiiD· 1 shared Brandon VaziD· 1 shared Brendan J. Frey· 1 shared Ceridwen I. FraseriD· 1 shared Chris ColeiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperGenomics

Albi CelajORCID

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2 papers

Recent·Most cited

Sequence based prediction of cell type specific microRNA binding and mRNA degradation for therapeutic discovery

Bhargav Kanuparthi, Sara E. Pour, Scott D. Findlay, Omar Wagih, Jahir M. Gutierrez, Rory Gao, Jeff A. Wintersinger, Jiun-Nong Lin, Martino Gabra, Emma Bohn, Tammy Lau, Chris Cole, Andrew Jung, Albi Celaj, Fraser Soares, , Brendan J. Frey

This paper introduces REPRESS, a deep learning model that predicts cell-type-specific microRNA binding and mRNA degradation from RNA sequences, outperforming existing methods in multiple tasks.

bioRxiv · May 15, 2025 · PreprintGenomics

A Cry For Kelp: Evidence for Polyphenolic Inhibition of Oxford Nanopore Sequencing of Brown Algae

William S. Pearman, Vanessa Arranz, Jose I. Carvajal, Annabel C. Whibley, Yusmiati Liau, Katherine Johnson, Rachel Gray, Jackson M. Treece, Neil J. Gemmell, Libby Liggins, Ceridwen I. Fraser, Evelyn L. Jensen, Nicholas J. Green

The paper shows that polyphenols in dried macroalgal DNA inhibit Oxford Nanopore sequencing, reducing yield and pore availability.

Journal of Phycology · Oct 22, 2024Peer-reviewedMolecular Biology