Author

Katie Gu

Washington University in St. Louis

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Synthetic Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:deep learning· 1 Approach:experimental assay· 1

Frequent Co-Authors

Addie Petersen· 1 shared Brian B. VuongiD· 1 shared Dylan Spangle· 1 shared Gordon L. Sun· 1 shared Ileana PirozziiD· 1 shared Jingcheng WuiD· 1 shared Joseph Baeza· 1 shared Kara J. Helmke Rogers· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperSynthetic Biology

Addie Petersen

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

DeepTAP: an RNN-based method of TAP-binding peptide prediction in the selection of tumor neoantigens

Xue Zhi Zhang, Jingcheng Wu, Joseph Baeza, Katie Gu, Yichun Zheng, Shuqing Chen, Zhan Mei Zhou

DeepTAP predicts TAP-binding peptides using an RNN, outperforming existing methods on benchmark datasets.

Computers in Biology and Medicine · Jul 8, 2023Peer-reviewedBioinformatics

Getting there and staying there: supporting and enabling persistent human life on Mars using synthetic natural rubber, self-healing materials, and biological batteries.

Nischal Acharya, Natalie Baker, Marilu Krystal Bravo, Katie Gu, Sierra Harken, Michael Howland Herschl, Addie Petersen, Ileana Pirozzi, Dylan Spangle, Gordon L. Sun, Brian B. Vuong, Nils J. H. Averesch, Kosuke Fujishima, Trevor J. Kalkus, Kara J. Helmke Rogers, Lynn J. Rothschild

The paper proposes using biological solutions like self-healing materials, biobatteries, and synthetic rubber-producing bacteria to enhance sustainability and reduce costs for Mars exploration.

bioRxiv · Jun 12, 2018 · PreprintSynthetic Biology