Author

Kohei Fujiwara

Kyoto University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1 Organism:non-human primate· 1 Approach:optimal transport· 1

Frequent Co-Authors

Masahiro NaganoiD· 1 shared Masanori Imamura· 1 shared Mitinori SaitouiD· 1 shared Tomonori NakamuraiD· 1 shared Yasuaki HiraokaiD· 1 shared Yusuke ImotoiD· 1 shared Yuya TokutaiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Masahiro NaganoORCID

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1 paper

Recent·Most cited

Geometric inference of cross-species transcriptome correspondence using Gromov-Wasserstein optimal transport

Yuya Tokuta, Tomonori Nakamura, Kohei Fujiwara, Masanori Imamura, Masahiro Nagano, Mitinori Saitou, Yusuke Imoto, Yasuaki Hiraoka

Species-OT uses Gromov-Wasserstein optimal transport to compare transcriptome geometries across species, identifying gene correspondences and transcriptomic discrepancies.

Cell Reports Methods · Oct 1, 2026Peer-reviewedBioinformatics