Author

L. Joffrin

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Evolutionary Biology· 3 Ecology· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:host-pathogen & immune response· 4 Organism:mouse· 3 Approach:statistical model· 3 Approach:experimental assay· 2 Assay:metagenomics· 2 Research Focus:clustering· 1 Assay:DNA methylation· 1 Assay:proteomics· 1

Frequent Co-Authors

C. Lebarbenchon· 5 shared P. Mavingui· 5 shared A. O. G. Hoarau· 3 shared G. Le Minter· 3 shared R. V. Ramanantsalama· 3 shared D. A. Wilkinson· 2 shared E. Lagadec· 2 shared M. Dietrich· 2 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

5 shared papersEvolutionary Biology

C. Lebarbenchon

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Role of individual and population heterogeneity in shaping dynamics of multi-pathogen shedding in an island endemic bat

S. Aguillon, M. Turpin, G. Le Minter, C. Lebarbenchon, A. O. G. Hoarau, C. Toty, A. Duchet, L. Joffrin, R. V. Ramanantsalama, P. Tortosa, P. Mavingui, M. Dietrich

This study examines shedding dynamics of multiple pathogens in bats, finding high prevalence and co-shedding, with patterns influenced by age and reproductive periods.

bioRxiv · Jun 25, 2024Evolutionary Biology

Synchronicity of viral shedding in molossid bat maternity colonies

A. O. G. Hoarau, M. Köster, M. Dietrich, G. Le Minter, L. Joffrin, R. V. Ramanantsalama, P. Mavingui, C. Lebarbenchon

The paper examines viral shedding patterns in bat maternity colonies, finding seasonal influences and reproducibility across years and colonies for some viruses.

bioRxiv · Aug 16, 2022Ecology

Astrovirus in Reunion Free-tailed Bat (Mormopterus francoismoutoui)

L. Joffrin, A. O. G. Hoarau, E. Lagadec, M. Koster, R. V. Ramanantsalama, P. Mavingui, C. Lebarbenchon

The paper investigates AstV infection in Reunion free-tailed bats, finding 7.1% positivity and genetic diversity, with viruses related to non-bat hosts.

bioRxiv · Jun 4, 2021Ecology

Bat coronavirus phylogeography in the western Indian Ocean

L. Joffrin, S. M. Goodman, D. A. Wilkinson, B. Ramasindrazana, E. Lagadec, Y. Gomard, G. Le Minter, A. Dos Santos, M. C. Schoeman, R. Sookhareea, P. Tortosa, S. Julienne, E. Gudo, P. Mavingui, C. Lebarbenchon

This study identifies coronavirus prevalence and phylogenetic diversity in bats across the Western Indian Ocean, finding higher prevalence in continental Africa and strong host-virus co-evolution.

bioRxiv · Mar 17, 2020Evolutionary Biology

Partial RdRp sequences offer a robust method for Coronavirus subgenus classification

D. A. Wilkinson, L. Joffrin, C. Lebarbenchon, P. Mavingui

This paper proposes using partial RdRp sequences for robust subgenus classification of coronaviruses and provides an R package for this task.

bioRxiv · Mar 2, 2020 · PreprintEvolutionary Biology