clusterExperiment and RSEC: A Bioconductor package and framework for clustering of single-cell and other large gene expression datasets
Davide Risso, Liam Purvis, Russell B. Fletcher, Diya Das, John Ngai, Sandrine Dudoit, Elizabeth A. Purdom
The paper introduces clusterExperiment, a Bioconductor package for clustering large gene expression datasets using Resampling-based Sequential Ensemble Clustering (RSEC) to identify biologically meaningful subtypes.
PLoS Computational Biology · Sep 4, 2018Peer-reviewedBioinformatics