Author

Maggie Fu

University of British Columbia

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

David H. RehkopfiD· 2 shared Joanne WhiteheadiD· 2 shared Julia L. MacIsaaciD· 2 shared Keegan D. KorthaueriD· 2 shared Luis Rosero‐BixbyiD· 2 shared Michael Steffen KoboriD· 2 shared Zheng DongiD· 2 shared Étienne PatiniD· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenetics

David H. RehkopfORCID

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2 papers

Recent·Most cited

Genetic Basis, Quantitative Nature, and Functional Relevance of Evolutionarily Conserved DNA Methylation

Zheng Dong, Samantha L. Schaffner, Maggie Fu, Joanne Whitehead, Julia L. MacIsaac, David H. Rehkopf, William Thomas Boyce, Luis Rosero‐Bixby, Lluís Quintana‐Murci, Étienne Patin, Gregory E. Miller, Keegan D. Korthauer, Michael Steffen Kobor

The paper identifies evolutionarily conserved DNA methylation sites in great apes and shows their association with cancer but not other diseases.

bioRxiv · Nov 7, 2024 · PreprintGenetics

Complete Reference Genome and Pangenome Expand Biologically Relevant Information for Genome-Wide DNA Methylation Analysis Using Short-Read Sequencing and Array Data

Zheng Dong, Joanne Whitehead, Maggie Fu, Julia L. MacIsaac, David H. Rehkopf, Luis Rosero‐Bixby, Michael Steffen Kobor, Keegan D. Korthauer

This study shows that using updated reference genomes like T2T-CHM13 and pangenomes increases CpG detection in DNA methylation analysis and improves probe specificity in arrays, leading to more accurate findings in cancer studies.

bioRxiv · Oct 7, 2024 · PreprintGenomics