A fast, reproducible, high-throughput variant calling workflow for evolutionary, ecological, and conservation genomics
Cade Mirchandani, Allison J. Shultz, Gregg W.C. Thomas, Sara J. Smith, Mara Baylis, Brian Arnold, Russell B Corbett-Detig, Erik D. Enbody, Timothy B. Sackton
This paper introduces snpArcher, a variant calling workflow for non-model organisms, and applies it to 26 public datasets to enable comparative population genomic analyses.
Molecular Biology and Evolution · Dec 9, 2023Peer-reviewedGenomics