Author

Marcia L. Kalish

Vanderbilt University

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:clustering· 1 Assay:DNA methylation· 1 Approach:statistical model· 1 Organism:virus· 1

Frequent Co-Authors

Art F. Y. PooniD· 1 shared Connor Chato· 1 shared Hui XingiD· 1 shared Joshua T. HerbeckiD· 1 shared Yi FengiD· 1 shared Yuhua RuaniD· 1 shared

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2022-2022 · peak 1/yr

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Art F. Y. PoonORCID

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1 paper

Recent·Most cited

Optimized phylogenetic clustering of HIV-1 sequence data for public health applications

Connor Chato, Yi Feng, Yuhua Ruan, Hui Xing, Joshua T. Herbeck, Marcia L. Kalish, Art F. Y. Poon

This paper introduces a method to optimize phylogenetic clustering thresholds for HIV-1 sequence data, showing that optimal thresholds vary by population and improve cluster growth prediction.

PLoS Computational Biology · Nov 30, 2022Peer-reviewedBioinformatics