Author

Yuhua Ruan

Chinese Center For Disease Control and PreventionORCID 0000-0003-2346-9154Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:clustering· 1 Assay:DNA methylation· 1 Approach:statistical model· 1 Organism:virus· 1

Frequent Co-Authors

Art F. Y. PooniD· 1 shared Connor Chato· 1 shared Hui XingiD· 1 shared Joshua T. HerbeckiD· 1 shared Marcia L. Kalish· 1 shared Yi FengiD· 1 shared

Activity by Year

2022-2022 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Art F. Y. PoonORCID

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1 paper

Recent·Most cited

BioinformaticsPLoS Computational BiologyPeer-reviewedNov 30, 2022

Optimized phylogenetic clustering of HIV-1 sequence data for public health applications

Connor Chato, Yi Feng, Yuhua Ruan…·Art F. Y. Poon

This paper introduces a method to optimize phylogenetic clustering thresholds for HIV-1 sequence data, showing that optimal thresholds vary by population and improve cluster growth prediction.

8 citations

virusDNA methylation

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