Author

Hui Xing

Chinese Center For Disease Control and PreventionORCID 0000-0002-9213-2531Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:clustering· 1 Assay:DNA methylation· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:proteomics· 1 Organism:virus· 1

Frequent Co-Authors

Yi FengiD· 2 shared Art F. Y. PooniD· 1 shared Beili Wu· 1 shared Connor Chato· 1 shared Fan Li· 1 shared Hong Peng· 1 shared Hongshuo Song· 1 shared Jing Hu· 1 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersBioinformatics

Yi FengORCID

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2 papers

Recent·Most cited

BioinformaticsPLoS Computational BiologyPeer-reviewedNov 30, 2022

Optimized phylogenetic clustering of HIV-1 sequence data for public health applications

Connor Chato, Yi Feng, Yuhua Ruan…·Art F. Y. Poon

This paper introduces a method to optimize phylogenetic clustering thresholds for HIV-1 sequence data, showing that optimal thresholds vary by population and improve cluster growth prediction.

8 citations

virusDNA methylation

𝕏 PostBluesky

MicrobiologybioRxivPreprintSep 26, 2018

Rapid CD4 cell loss is caused by specific CRF01_AE cluster with V3 signatures favoring CXCR4 usage

Hongshuo Song, Weidong Ou, Yi Feng…·Yiming Shao

The paper identifies a specific CRF01_AE HIV-1 phylogenetic cluster associated with rapid CD4 cell loss and higher prevalence of CXCR4-using viruses.

DOI 10.1101/427625

humanproteomics

𝕏 PostBluesky