Systematic benchmarking of commercial workflows for isoform-resolved single-nucleus transcriptomics
Florian Köhler, Anna Delgado-Tejedor, Maik Zehnsdorf, Marisol Salgado Albarran, Laura Zalba Jadraque, Irene González Navarrete, Luca Cozzuto, Julia V. Ponomarenko, Berta Fuste Perez
This study benchmarks four commercial LR snRNA-seq workflows, finding 10x Genomics 3' and 5' to be the most balanced for isoform-resolved single-nucleus transcriptomics.
bioRxiv · Sep 4, 2026 · PreprintGenomics