Author

Matan Hofree

Hebrew University of JerusalemPrimary ORCID profile (0000-0001-8368-0299 · 5 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Matan HofreeiD5 papers · Broad Institute

Biology Disciplines

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Bioinformatics· 1

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Research Focus:cell type annotation· 1 Approach:deep learning· 1 Organism:human· 1 Research Focus:perturbation response prediction· 1 Assay:scRNA-seq· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Anas BedraouiiD· 1 shared Fatima Zahra El Hajji· 1 shared Rachid El FatimyiD· 1 shared Salim El MejjadiD· 1 shared Salwa Enezari· 1 shared Tariq DaoudaiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Anas BedraouiORCID

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1 paper

Recent·Most cited

scDisentangle: sequential disentanglement for single-cell perturbation response prediction

Salim El Mejjad, Salwa Enezari, Anas Bedraoui, Fatima Zahra El Hajji, Rachid El Fatimy, Matan Hofree, Tariq Daouda

scDisentangle predicts single-cell transcriptional responses to perturbations by decomposing expression into residual components, outperforming existing methods in cytokine stimulation, infection, and genetic perturbations.

bioRxiv · Nov 6, 2026 · PreprintBioinformatics