Author

Md. Hasibul Husain Hisham

Bangladesh University of Engineering and Technology

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Assay:spatial transcriptomics· 1

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Atif Hasan RahmaniD· 1 shared Francisco Grisanti· 1 shared James F. MartiniD· 1 shared Mashrur Ahmed Yafi· 1 shared Md. Abul Hassan SameeiD· 1 shared

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BioinformaticsGenome biologyPeer-reviewedFeb 26, 2024

Gene panel design for spatial transcriptomics with prioritized gene sets

Mashrur Ahmed Yafi, Md. Hasibul Husain Hisham, Francisco Grisanti…·Md. Abul Hassan Samee

This paper introduces scGIST, a deep learning method for designing spatial transcriptomics panels that prioritizes genes of interest while maintaining accuracy in cell type detection.

13 citations

spatial transcriptomicsdeep learning

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