Author

Francisco Grisanti

Baylor College of Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Developmental Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:spatial transcriptomics· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:mouse· 1

Frequent Co-Authors

James F. MartiniD· 2 shared Md. Abul Hassan SameeiD· 2 shared Atif Hasan RahmaniD· 1 shared Chang-Ru TsaiiD· 1 shared Fansen MengiD· 1 shared Gang LiiD· 1 shared Jeffrey D. SteimleiD· 1 shared Jong Kyoung KimiD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

James F. MartinORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Gene panel design for spatial transcriptomics with prioritized gene sets

Mashrur Ahmed Yafi, Md. Hasibul Husain Hisham, Francisco Grisanti, James F. Martin, Atif Hasan Rahman, Md. Abul Hassan Samee

This paper introduces scGIST, a deep learning method for designing spatial transcriptomics panels that prioritizes genes of interest while maintaining accuracy in cell type detection.

Genome biology · Feb 26, 2024Peer-reviewedBioinformatics

Hippo-deficient cardiac fibroblasts differentiate into osteochondroprogenitors

Chang-Ru Tsai, Jong Kyoung Kim, Xiao Li, Paulo Czarnewski, Gang Li, Fansen Meng, Mingjie Zheng, Xiaolei Zhao, Jeffrey D. Steimle, Francisco Grisanti, Jun Wang, Md. Abul Hassan Samee, James F. Martin

This study shows that Hippo-deficient cardiac fibroblasts differentiate into osteochondroprogenitors and interact with macrophages, promoting fibrosis through CSF1 signaling.

bioRxiv · Sep 6, 2023 · PreprintDevelopmental Biology