Author

Melih Gökay Yiğit

Middle East Technical University

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Biology Disciplines

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Bioinformatics· 1

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Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:protein sequence· 1

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Ardan YılmaziD· 1 shared Elif ÇevrimiD· 1 shared Erva UlusoyiD· 1 shared Tunca DoğaniD· 1 shared

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2025-2025 · peak 1/yr

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1 paper

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BioinformaticsMethods in molecular biologyPeer-reviewedJan 1, 2025

A Benchmarking Platform for Assessing Protein Language Models on Function-related Prediction Tasks

Elif Çevrim, Melih Gökay Yiğit, Erva Ulusoy…·Tunca Doğan

This study introduces PROBE, a benchmarking framework for evaluating protein representations on function-related tasks, demonstrating its use with ESM2 and three multimodal PLMs.

4 citationstop 2%

protein sequencebenchmark study

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