Author

Michael J Axtell

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Organism:Arabidopsis· 2 Research Focus:chromatin & epigenetic regulation· 2 Approach:experimental assay· 2 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Ceyda Coruh· 2 shared Feng Wang· 2 shared Nathan R Johnson· 2 shared Jonathan M Yeoh· 1 shared

Activity by Year

2016-2016 · peak 3/yr

Co-Author Collaboration Network

4 top collaborators · 5 mutual co-author links

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2 shared papersPlant Biology

Ceyda Coruh

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3 papers

Recent·Most cited

AGO4 is specifically required for heterochromatic siRNA accumulation at Pol V-dependent loci in Arabidopsis thaliana

Feng Wang, Michael J Axtell

This study shows AGO4 is required for specific heterochromatic siRNA accumulation in Arabidopsis, and its slicing activity is critical for this process.

bioRxiv · Sep 30, 2016Plant Biology

Genome-Wide Analysis of Single Non-Templated Nucleotides in Plant Endogenous siRNAs and miRNAs

Feng Wang, Nathan R Johnson, Ceyda Coruh, Michael J Axtell

The paper analyzes non-templated nucleotides in plant small RNAs across multiple species, finding elevated rates at 3' ends of miRNAs and siRNAs in wild-type plants.

bioRxiv · May 12, 2016Plant Biology

Improved Placement of Multi-Mapping Small RNAs

Nathan R Johnson, Jonathan M Yeoh, Ceyda Coruh, Michael J Axtell

This paper introduces a local-weighting method to improve the placement of multi-mapping small RNA-seq reads, showing better performance than existing methods in plant genomes.

bioRxiv · May 9, 2016Bioinformatics