Blueprint for Phasing and Assembling the Genomes of Heterozygous Polyploids: Application to the Octoploid Genome of Strawberry
Michael A. Hardigan, Mitchell J. Feldmann, Dominique D. A. Pincot, Randi A. Famula, Michaela V. Vachev, Mary A. Madera, Philipp Zerbe, Kristin Mars, Paul S. Peluso, David R. Rank, Shujun Ou, Christopher A. Saski, Charlotte B. Acharya, Glenn S. Cole, Alan E. Yocca, , Steven J. Knapp
Trio-binned PacBio HiFi reads plus a 3.6 M-variant recombination map give phase-resolved assemblies of octoploid strawberry 'Royal Royce' and FaRR1, a 786.5 Mb haploid reference with 28 pseudomolecules.
bioRxiv · Nov 3, 2021 · PreprintGenomics✦ In-depth digest