Author

Michel Tarnow

ETH Zurich

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Approach:contrastive learning· 1 Research Focus:dimensionality reduction· 1 Approach:graph neural network· 1 Organism:human· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Bianca DumitrascuiD· 1 shared Dreyton AmadoriD· 1 shared Jonathan Chin CheongiD· 1 shared Jose Pomarino Nima· 1 shared Lovro RabuziniD· 1 shared Mark D. RobinsoniD· 1 shared Ozgur BekeriD· 1 shared Simon Van Deursen· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperGenomics

Bianca DumitrascuORCID

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2 papers

Recent·Most cited

Exploring Augmentation-Driven Invariances for Graph Self-supervised Learning in Spatial Omics

Lovro Rabuzin, Michel Tarnow, Valentina Boeva

This study evaluates how different graph augmentations affect embedding quality and downstream performance in spatial omics, showing that well-designed augmentations improve results while poor ones can harm performance.

bioRxiv · Sep 23, 2025 · PreprintBioinformatics

Patches: A Representation Learning framework for Decoding Shared and Condition-Specific Transcriptional Programs in Wound Healing

Ozgur Beker, Simon Van Deursen, Michel Tarnow, Dreyton Amador, Jonathan Chin Cheong, Jose Pomarino Nima, Mark D. Robinson, Yvon Woappi, Bianca Dumitrascu

Patches decodes shared and condition-specific transcriptional programs in wound healing using scRNA-seq data, revealing universal patterns and treatment-specific changes.

bioRxiv · Dec 23, 2024 · PreprintGenomics