Author

Jonathan Chin Cheong

Columbia UniversityORCID 0000-0003-2226-4202Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Assay:CITE-seq· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Dreyton AmadoriD· 2 shared Simon Van Deursen· 2 shared Yvon WoappiiD· 2 shared Bianca DumitrascuiD· 1 shared Jose Pomarino Nima· 1 shared Mark D. RobinsoniD· 1 shared Michel Tarnow· 1 shared Ozgur BekeriD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 31 mutual co-author links

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2 shared papersCell Biology

Dreyton AmadorORCID

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2 papers

Recent·Most cited

Cell BiologybioRxivPreprintJan 16, 2026

4D multimodal wound healing atlas reveals organ-level controls of repair phase transitions

Jonathan Chin Cheong, Simon Van Deursen, Dreyton Amador…·Yvon Woappi

The paper presents OWHA, a 4D multimodal atlas of wound healing in mice, revealing a conserved Basal IV/SEMA3C circuit that coordinates repair, and shows its disruption in diabetic wounds.

1 citation

mousesnRNA-seq

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GenomicsbioRxivPreprintDec 23, 2024

Patches: A Representation Learning framework for Decoding Shared and Condition-Specific Transcriptional Programs in Wound Healing

Ozgur Beker, Simon Van Deursen, Michel Tarnow…·Bianca Dumitrascu

Patches decodes shared and condition-specific transcriptional programs in wound healing using scRNA-seq data, revealing universal patterns and treatment-specific changes.

1 citation

humanscRNA-seq

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