Author

Mina Jung

University of Southern California

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Organism:human· 1

Frequent Co-Authors

Abdullah Al NahidiD· 1 shared Alex ZelikovskyiD· 1 shared Austin NguyeniD· 1 shared Dottie YuiD· 1 shared Grigore BoldireviD· 1 shared Hafsa FarooqiD· 1 shared Houda AlachkariD· 1 shared Jong Wha J. JooiD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Abdullah Al NahidORCID

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1 paper

Recent·Most cited

A rigorous benchmarking of alignment-based HLA callers for RNA-seq data

Dottie Yu, Ram Ayyala, Sarah Hany Sadek, Likhitha Chittampalli, Hafsa Farooq, Junghyun Jung, Abdullah Al Nahid, Grigore Boldirev, Mina Jung, Sung‐Min Park, Austin Nguyen, Alex Zelikovsky, Nicholas Mancuso, Jong Wha J. Joo, Reid F. Thompson, , Serghei Mangul

This study benchmarks 12 HLA callers on RNA-seq data across 682 samples to evaluate accuracy, computational cost, and performance differences by ancestry.

bioRxiv · May 22, 2023 · PreprintBioinformatics