GSA: An Independent Development Algorithm for Calling Copy Number and Detecting Homologous Recombination Deficiency (HRD) from Target Capture Sequencing
Dongju Chen, Minghui Shao, Pei Meng, Chunli Wang, Qi Li, Yuhang Cai, Chengcheng Song, Xi Wang, Taiping Shi
This paper introduces GSA, an algorithm for calculating tumor purity, ploidy, and HRD scores from target capture sequencing data, showing high accuracy and sensitivity in clinical samples.
BMC Bioinformatics · Nov 23, 2021Peer-reviewedBioinformatics