A knowledge graph-guided framework for multitask single-cell analysis
Bernadette Mathew, Akash Maity, Ritwik Ganguly, Abhishek Halder, Justin Thomas Sabu, Neha Gupta, Sreeram Chandra Murthy Peela, Swarnava Samanta, Stuti Kumari, Nilabja Bhattacharjee, Shalaka Joshi, Sudeep Gupta, Gaurav Ahuja, Mohammed Farooq, Ralf Herwig, , Debarka Sengupta
scKNIFE integrates gene expression with functional annotations to identify tumor programs and treatment-related functional variation in breast cancer.
bioRxiv · Oct 24, 2026 · PreprintCancer Biology