Evolutionary BiologyGenome BiologyPeer-reviewed
ContamLD: Estimation of Ancient Nuclear DNA Contamination Using Breakdown of Linkage Disequilibrium
N. J. Nakatsuka, E. Harney, S. Mallick…·D. E. Reich
ContamLD estimates ancient DNA contamination by analyzing linkage disequilibrium breakdown, showing accurate contamination rate inference with low error in simulated data.
DOI 10.1186/s13059-020-02111-2