Author

N. Kyrpides

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 3 Ecology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:metagenomics· 5 Research Focus:cell type annotation· 3 Organism:plant (other)· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:clustering· 1 Approach:comparative / phylogenetic analysis· 1 Research Focus:ecology & biodiversity· 1

Frequent Co-Authors

S. Roux· 3 shared A. P. Camargo· 2 shared M. Krupovic· 2 shared A. Clum· 1 shared A. Copeland· 1 shared A. Hirsch· 1 shared A. L. Borges· 1 shared A. S. Bhatt· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

S. Roux

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts

E. B. Graham, A. P. Camargo, R. Wu, R. Y. Neches, M. Nolan, D. Paez-Espino, N. Kyrpides, J. K. K. Jansson, J. E. McDermott, K. S. Hofmockel, Soil Virosphere Consortium

The paper compiles a global soil virus dataset to assess biodiversity and biogeochemical impacts, finding most viral diversity remains unexplored and viruses may influence carbon and nutrient cycling.

bioRxiv · Nov 2, 2023Ecology

A vast world of viroid-like circular RNAs revealed by mining metatranscriptomes

B. D. Lee, U. Neri, S. Roux, Y. I. Wolf, A. P. Camargo, M. Krupovic, P. Simmonds, N. Kyrpides, U. Gophna, V. V. Dolja, E. V. Koonin

The paper identifies 11,420 viroid-like circular RNAs across 5,131 metatranscriptomes and 1,344 plant transcriptomes, revealing a five-fold increase in known viroid-like agents and novel ribozyme combinations.

bioRxiv · Jul 19, 2022 · PreprintMicrobiology

Impact of soil salinity on the cowpea nodule-microbiome and the isolation of halotolerant PGPR strains to promote plant growth under salinity stress

A. Hirsch, S. Mukhtar, N. Khan, K. Malik, E. Humm, M. Pellegrini, B. Shi, L. Briscoe, M. Hunteman, A. Clum, B. Foster, B. Foster, S. Roux, K. Palanlappan, N. Varghese, , S. Mehnaz

The paper examines how soil salinity affects cowpea nodule microbiomes and identifies halotolerant PGPR strains that enhance plant growth under salinity stress.

bioRxiv · Nov 27, 2019Plant Biology

Cryptic inoviruses are pervasive in bacteria and archaea across Earth's biomes

S. Roux, M. Krupovic, R. A. Daly, A. L. Borges, S. Nayfach, F. Schulz, J.-F. Cheng, N. N. Ivanova, J. Bondy-Denomy, K. C. Wrighton, T. Woyke, A. Visel, N. Kyrpides, E. A. Eloe-Fadrosh

The paper identifies 10,295 inovirus-like genomes across diverse ecosystems, revealing their widespread presence and complex interactions with bacterial and archaeal hosts.

bioRxiv · Feb 15, 2019Microbiology

Large-scale analyses of human microbiomes reveal thousands of small, novel genes and their predicted functions

H. Sberro, N. Greenfield, G. Pavlopoulos, N. Kyrpides, A. S. Bhatt

This study identifies thousands of novel small genes in human microbiomes and predicts their functions, highlighting their potential roles in host interactions and bacterial adaptation.

bioRxiv · Dec 13, 2018Microbiology