Author

N. M. M'ikanatha

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 5 Approach:statistical model· 3 Research Focus:clustering· 2 Approach:experimental assay· 2 Research Focus:variant calling· 2 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1

Frequent Co-Authors

E. G. Dudley· 5 shared Y. Fu· 3 shared A. B. Keefer· 1 shared C. A. Whitehouse· 1 shared E. M. Nawrocki· 1 shared J. C. Smith· 1 shared K. Yao· 1 shared L. Xiaoli· 1 shared

Activity by Year

2018-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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5 shared papersMicrobiology

E. G. Dudley

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5 papers

Recent·Most cited

MicrobiologybioRxivPreprintNov 17, 2022

Population structure and genetic diversity of Salmonella Typhimurium in avian hosts

Y. Fu, N. M. M'ikanatha, E. G. Dudley

The paper analyzes Salmonella Typhimurium strains from avian hosts using whole-genome sequencing to identify seven host-associated variants and their genetic and virulence characteristics.

DOI 10.1101/2022.11.17.516949

zebrafishwhole-genome sequencing

𝕏 PostBluesky

MicrobiologyApplied and Environmental MicrobiologyPeer-reviewedMar 22, 2022

Salmonella enterica serovar Typhimurium from Wild Birds in the United States Represent Distinct Lineages Defined by Bird Type

Y. Fu, N. M. M'ikanatha, C. A. Whitehouse…·E. G. Dudley

This study sequenced S. Typhimurium strains from wild birds in the U.S. and identified three distinct lineages associated with different bird types, improving source attribution and outbreak investigation.

DOI 10.1128/aem.01979-21

whole-genome sequencingstatistical model

𝕏 PostBluesky

MicrobiologybioRxivPreprintMar 8, 2022

Comparative Genomic Analysis of Salmonella enterica serovar Typhimurium from Passerines Reveals Two Lineages Circulating in Europe, New Zealand, and the United States

Y. Fu, N. M. M'ikanatha, E. G. Dudley

This study uses comparative genomics to analyze Salmonella Typhimurium isolates from passerines, revealing two distinct lineages circulating in Europe, the US, and New Zealand with unique genetic signatures.

DOI 10.1101/2022.03.08.483506

multiple specieswhole-genome sequencing

𝕏 PostBluesky

MicrobiologybioRxivJul 3, 2018

Whole genome sequencing of antimicrobial-resistant Shigella sonnei associated with infection acquired from international and domestic setting reveals gene allelic variants that predict Global Lineages

R. L. Abelman, N. M. M'ikanatha, E. G. Dudley

This study uses whole genome sequencing to analyze antimicrobial-resistant Shigella sonnei isolates from domestic and international sources, identifying gene variants that predict Global Lineages and AMR determinants.

DOI 10.1099/mgen.0.000270

humanwhole-genome sequencing

𝕏 PostBluesky

MicrobiologybioRxivJun 27, 2018

Retrospective whole-genome sequencing analysis distinguished PFGE and drug resistance matched retail meat and clinical Salmonella isolates

A. B. Keefer, L. Xiaoli, N. M. M'ikanatha…·E. G. Dudley

This study used whole-genome sequencing to compare retail meat and clinical Salmonella isolates, revealing genetic differences and antimicrobial resistance patterns.

DOI 10.1099/mic.0.000768

whole-genome sequencingexperimental assay

𝕏 PostBluesky