Author

N. R. Sinha

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 6 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 7 Assay:bulk RNA-seq· 5 Research Focus:cell type annotation· 5 Approach:experimental assay· 5 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

H. Nakayama· 4 shared S. D. Rowland· 3 shared K. Zumstein· 2 shared M. Farhi· 2 shared M.-Y. Jhu· 2 shared Z. Cheng· 2 shared A. M. Flores· 1 shared A. Tellier· 1 shared

Activity by Year

2017-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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4 shared papersPlant Biology

H. Nakayama

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Evolution of two gene networks underlying adaptation to drought stress in the wild tomato Solanum chilense

K. Wei, S. Sharifova, X. Zhao, N. R. Sinha, H. Nakayama, A. Tellier, G. A. Silva Arias

The paper studies the evolution of two gene networks in Solanum chilense under drought stress, finding that the metabolic network is younger and under recent selection, while the cell-cycle network is ancient and conserved.

bioRxiv · Jan 18, 2023Evolutionary Biology

Lignin-based resistance to Cuscuta campestris parasitism in Heinz resistant tomato cultivars

M.-Y. Jhu, M. Farhi, L. Wang, R. N. Philbrook, M. S. Belcher, H. Nakayama, K. S. Zumstein, S. D. Rowland, M. Ron, P. M. Shih, N. R. Sinha

Four key regulators confer lignin accumulation in the tomato stem cortex to block C. campestris host penetration upon infection.

bioRxiv · Jul 29, 2021 · PreprintPlant Biology

Analysis of Classic Tomato Mutants Reveals Influence of Leaf Vein Density on Fruit BRIX

Z. Cheng, S. D. Rowland, K. Czarnecki, K. Zumstein, H. Nakayama, N. R. Sinha

The paper analyzes tomato mutants to show leaf vein density negatively correlates with fruit BRIX, linking leaf morphology to fruit sugar levels through gene expression changes.

bioRxiv · Mar 1, 2021 · PreprintPlant Biology

CcLBD25 functions as a key regulator of haustorium development in Cuscuta campestris

M.-Y. Jhu, Y. Ichihashi, M. Farhi, C. Wong, N. R. Sinha

This study identifies CcLBD25 as a key regulator of haustorium development in Cuscuta campestris, showing its role in pectin digestion and hyphae formation.

bioRxiv · Jan 4, 2021 · PreprintPlant Biology

Spatial transcriptional signatures define margin morphogenesis along the proximal-distal and medio-lateral axes in complex leaf species Solanum lycopersicum (tomato)

C. C. Martinez, S. Li, M. R. Woodhouse, K. Sugimoto, N. R. Sinha

The paper uses structural characterization, laser capture microdissection, and transcriptomic sequencing to reveal gene expression patterns regulating early compound leaf morphogenesis in tomato.

bioRxiv · Aug 13, 2020Plant Biology

Leaf shape is a predictor of fruit quality and cultivar performance in tomato

S. D. Rowland, K. Zumstein, H. Nakayama, Z. Cheng, A. M. Flores, D. H. Chitwood, J. N. Maloof, N. R. Sinha

The paper investigates how leaf shape affects fruit quality and yield in tomato cultivars, finding that rounder leaves correlate with higher sugar content and yield.

bioRxiv · Mar 21, 2019Plant Biology

Nuclear transcriptomes at high resolution using retooled INTACT

M. A. Reynoso, G. C. Pauluzzi, K. Kajala, S. Cabanlit, J. Velasco, J. Bazin, R. Deal, N. R. Sinha, S. M. Brady, J. Bailey-Serres

The paper retools the INTACT method for rice to enable high-resolution analysis of nuclear transcriptomes and chromatin in specific cell types.

bioRxiv · Aug 25, 2017Plant Biology