Author

N.D.P. Vanegas

The Ohio State University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Organism:mouse· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Ahmed H. GhobashiiD· 2 shared Ana Lucia MoraiD· 2 shared Qin MaiD· 2 shared Anjun MaiD· 1 shared Cankun WangiD· 1 shared Carter AlleniD· 1 shared Dongjun ChungiD· 1 shared H Chen· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Ahmed H. GhobashiORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

SpaFlow depicts the dynamics of ligand-receptor interaction in spatial transcriptomics data

H Chen, Xiaoying Wang, Yuhan Sun, N.D.P. Vanegas, Jhonny Rodriguez, Ahmed H. Ghobashi, Anjun Ma, Ana Lucia Mora, Mauricio Rojas, Qin Ma

SpaFlow models ligand-receptor interactions in spatial transcriptomics data by simulating diffusion and binding processes, revealing spatially coherent signaling patterns in multiple disease contexts.

bioRxiv · Apr 21, 2026 · PreprintBioinformatics

Defining transcriptomic niches in human fibrotic lung with multi-sample spatial transcriptomics analysis using the MAPLE algorithm

Hyeongseon Jeon, Carter Allen, N.D.P. Vanegas, Juan Xie, Ahmed H. Ghobashi, Jhonny Rodriguez-Lopez, Lorena Rosas, Cankun Wang, Hao Cheng, Yuzhou Chang, Konstantin Shilo, Qin Ma, Ana Lucia Mora, Mauricio M. Rojas, Dongjun Chung

The paper uses spatial transcriptomics and the MAPLE algorithm to analyze fibrotic lung tissue, identifying spatial biomarkers and fibrotic programs in IPF.

bioRxiv · Feb 28, 2022 · PreprintBioinformatics