Shallow sequencing (Shall-seq) procedure: A method for determining the genetic lineages and detecting antimicrobial resistance genes of antimicrobial-resistant bacteria using minimum Nanopore sequencing data
Nobuyoshi Yagi, Nanase Miyagi, Ayumi Uechi, Itaru Hirai
This paper introduces a shallow sequencing method using Nanopore data to determine genetic lineages and detect antimicrobial resistance genes in E. coli with minimal data.
bioRxiv · Jun 25, 2024 · PreprintMicrobiology