Author

Nicole C. El-Ali

University of California, Irvine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1 Assay:scATAC-seq· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Ali MortazaviiD· 1 shared Ana ConesaiD· 1 shared Camden S. JanseniD· 1 shared David Gómez-CabreroiD· 1 shared Jesper N. TegneriD· 1 shared Matthias MerkenschlageriD· 1 shared Ricardo N. RamíreziD· 1 shared

Activity by Year

2019-2019 · peak 1/yr

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7 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Ali MortazaviORCID

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1 paper

Recent·Most cited

GenomicsPLoS Computational BiologyPeer-reviewedNov 4, 2019

Building gene regulatory networks from single-cell ATAC-seq and RNA-seq using Linked Self-Organizing Maps

Camden S. Jansen, Ricardo N. Ramírez, Nicole C. El-Ali…·Ali Mortazavi

The paper introduces a method to build gene regulatory networks from scATAC-seq and scRNA-seq data using linked self-organizing maps, demonstrating its application in mouse pre-B cell differentiation.

92 citations

mousescATAC-seq

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