Camden S. Jansen

This study identifies conserved and species-specific cis-regulatory elements in human and mouse blood cells using integrative epigenomic analysis and clustering.

The paper builds a genome-scale gene regulatory network for vertebrate mesendoderm development using multi-omic data integration and validates novel transcription factor interactions.

The paper performs a comprehensive phenotypic analysis of the 5xFAD mouse model across its lifespan, identifying novel age-related pathological features.

The paper identifies gene regulatory networks driving macrophage polarization using bulk and single-cell RNA-seq and ATAC-seq data from HL-60-derived macrophages.

The paper introduces a method to build gene regulatory networks from scATAC-seq and scRNA-seq data using linked self-organizing maps, demonstrating its application in mouse pre-B cell differentiation.

The paper presents ChIP-seq data for 208 DNA-associated proteins in HepG2 cells, revealing occupancy patterns and DNA motifs, and distinguishing promoters from enhancers.