Author

P. Marcatili

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Biochemistry· 1 Bioengineering· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:biophysical modeling· 2 Research Focus:clustering· 2 Approach:deep learning· 2 Assay:proteomics· 2 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

C. Jacobsen· 2 shared E. B. Hansen· 2 shared M. T. Overgaard· 2 shared P. J. Garcia-Moreno· 2 shared A. Jafarpour· 1 shared B. Chain· 1 shared B. Yesiltas· 1 shared C. Würtzen· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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2 shared papersBioengineering

C. Jacobsen

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

DiscoTope-3.0 - Improved B-cell epitope prediction using AlphaFold2 modeling and inverse folding latent representations

M. H. Hoie, F. S. Gade, J. M. Johansen, C. Würtzen, O. Winther, M. Nielsen, P. Marcatili

DiscoTope-3.0 improves B-cell epitope prediction by using AlphaFold2 models and inverse folding representations, enhancing performance across experimental and predicted structures.

bioRxiv · Feb 5, 2023Immunology

Bioinformatically predicted emulsifying peptides and potato protein hydrolysate improves the oxidative stability of microencapsulated fish oil

M. Bjoerlie, B. Yesiltas, P. J. Garcia-Moreno, F. J. Espejo-Carpio, N. E. Rahmani-Manglano, E. M. Guadix, A. Jafarpour, E. B. Hansen, P. Marcatili, S. Gregersen Echers, M. T. Overgaard, C. Jacobsen

This study shows that bioinformatically predicted potato peptides and hydrolysate improve oxidative stability in microencapsulated fish oil compared to native proteins and sodium caseinate.

bioRxiv · Nov 18, 2022Bioengineering

T-cell Receptor Diversity Estimates for Repertoires (TCRDivER) uses sequence similarity to find signatures of immune response

M. Vujovic, P. Marcatili, B. Chain, J. Kaplinsky, T. L. Andresen

TCRDivER analyzes T-cell receptor repertoires using sequence similarity to identify immune response signatures in murine and human samples.

bioRxiv · Jan 11, 2021 · PreprintImmunology

Proteomic characterization of pilot scale hot-water extracts from the industrial carrageenan red seaweed Eucheuma denticulatum

S. Gregersen, M. Pertseva, P. Marcatili, S. L. Holdt, C. Jacobsen, P. J. Garcia-Moreno, E. B. Hansen, M. T. Overgaard

This study uses proteomics to characterize protein composition in hot-water extracts from Eucheuma denticulatum, finding that over 75% of quantified proteins are three previously uncharacterized extracellular proteins.

bioRxiv · Dec 14, 2020Biochemistry