Author

P. Natsidis

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Evolutionary Biology· 5

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Research Focus:phylogenetics / evolution· 4 Approach:statistical model· 3 Assay:proteomics· 2 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Approach:comparative / phylogenetic analysis· 1 Research Focus:gene regulatory network inference· 1 Organism:multiple species· 1

Frequent Co-Authors

M. J. Telford· 4 shared P. Kapli· 3 shared D. J. Leite· 2 shared P. H. Schiffer· 2 shared A. G. Morante· 1 shared A. Tsakogiannis· 1 shared A.-C. Zakrzewski· 1 shared B. Fromm· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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4 shared papersEvolutionary Biology

M. J. Telford

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5 papers

Recent·Most cited

Dollo parsimony overestimates ancestral gene content reconstructions

A. G. Morante, L. Gueguen, P. Natsidis, M. J. Telford, D. J. Richter

This study compares Dollo parsimony and maximum likelihood methods for ancestral gene content reconstruction, finding Dollo parsimony overestimates ancestral gene content, especially near the root of the tree.

bioRxiv · Nov 20, 2023Evolutionary Biology

The slow evolving genome of the xenacoelomorph worm Xenoturbella bocki

P. H. Schiffer, P. Natsidis, D. J. Leite, H. Robertson, F. Lapraz, F. Marletaz, B. Fromm, L. Baudry, F. Simpson, E. Hoye, A.-C. Zakrzewski, P. Kapli, K. J. Hoff, S. Mueller, M. Marbouty, , M. J. Telford

This study analyzes the genome of Xenoturbella bocki to assess its phylogenetic position and genomic complexity, finding it has a complex genome similar to other bilaterians.

bioRxiv · Jun 24, 2022 · PreprintEvolutionary Biology

Systematic errors in orthology inference: a bug or a feature for evolutionary analyses?

P. Natsidis, P. Kapli, P. H. Schiffer, M. J. Telford

The paper simulates orthology errors to show they increase with evolutionary rates and affect phylogenetic analyses and phylostratigraphy.

bioRxiv · Nov 3, 2020 · PreprintEvolutionary Biology

Lack of support for Deuterostomia prompts reinterpretation of the first Bilateria.

P. Kapli, P. Natsidis, D. J. Leite, M. Fursman, N. Jeffrie, I. A. Rahman, H. Philippe, R. Copley, M. J. Telford

The paper reevaluates the monophyly of Deuterostomia using phylogenomic datasets, finding weak support and suggesting systematic errors may explain apparent support.

bioRxiv · Jul 1, 2020Evolutionary Biology

Phylogenomics investigation of sparids (Teleostei: Spariformes) using high-quality proteomes highlights the importance of taxon sampling

P. Natsidis, A. Tsakogiannis, P. Pavlidis, C. S. Tsigenopoulos, T. Manousaki

The paper investigates sparid phylogeny using proteomes and finds Tetraodontiformes are closer relatives than previously thought, highlighting the importance of taxon sampling.

bioRxiv · Aug 24, 2019Evolutionary Biology