Author

Philippe C. Faucon

Arizona State University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:long-read sequencing· 2 Research Focus:benchmarking· 1 Approach:machine learning (classical)· 1 Approach:simulation· 1 Research Focus:software / tool· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Parithi BalachandraniD· 2 shared Kylie Standage-BeieriD· 1 shared Robert P. Treviño· 1 shared Sharon M. CrookiD· 1 shared Xiao WangiD· 1 shared

Activity by Year

2017-2017 · peak 2/yr

Co-Author Collaboration Network

5 top collaborators · 7 mutual co-author links

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2 shared papersBioinformatics

Parithi BalachandranORCID

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2 papers

Recent·Most cited

SNaReSim: Synthetic Nanopore Read Simulator

Philippe C. Faucon, Parithi Balachandran, Sharon M. Crook

This paper introduces SNaReSim, a new nanopore read simulator that better captures k-mer error distributions compared to existing tools.

IEEE International Conference on Healthcare Informatics (ICHI) · Aug 1, 2017Peer-reviewedBioinformatics

High Accuracy Base Calls in Nanopore Sequencing

Philippe C. Faucon, Robert P. Treviño, Parithi Balachandran, Kylie Standage-Beier, Xiao Wang

This paper introduces an unsupervised learning method to correct errors in nanopore sequencing data, achieving performance comparable to existing techniques while preserving repeat detection and long sequence analysis.

International Conference on Bioinformatics and Biomedical Science (ICBBS) · Jun 22, 2017Peer-reviewedBioinformatics